Grabherr Group Software

Below is a list of software developed and maintained by the Grabherr Group:

ANTology : An ant colony optimization algorithm and software

PiiL : the Pathway interactive data visualization tool

ACES : Machine learning toolbox for clustering analysis and visualization

Ananas : A de novo assembler of RNA-Sequence data

Smörgås : A web interface for alignments against protein databases

Kraken : A universal genomic coordinate translator for comparative genomics

inSeqt : A suite of QC tools for PacBio read data and assemblies

Saguaro : An unsupervised population genomics analysis program

Whiteboard : A programmatic interface for the visualization of complex biological data

Satsuma : A Highly sensitive whole-genome synteny aligner

MOOSE² : RNA-Seq expression normalization and DE significance

Cola : A modular and Configurable Optimal Sequence Aligner